Browse of TCMCG042C72357 protein

CDS

Accession Number	TCMCG042C72357
gbkey	CDS
Protein Id	XP_016504493.1
Location	join(7185..7268,7499..7615,7718..7924,8924..9025,9136..9267,9654..9784,9883..10002,10148..10271,10430..10627,12523..12641,12990..13140,15055..15167,15251..15332,15514..15600,15699..15776,15902..16105,17581..17673,17752..17865,18010..18180,18287..18342,18422..18494,18594..18784,18878..19004,19128..19205,20447..20608,22051..22221,22295..22432,24140..24283,24449..24571,24696..24791,24944..25081,25199..25299,26095..26214,26293..26392,26856..26939)
Gene	LOC107822457
GeneID	107822457
Organism	Nicotiana tabacum

Protein

Length	1442aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA319578
db_source	XM_016649007.1
Definition	PREDICTED: nuclear pore complex protein NUP205-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGAAGACCAAGATTCAGATCCCAGCAGAAACAGAATTGCTGGGTCATTTGTTCCCATCTGCCTAATCTTTGGTGGGGCATTGAGAGAACCCGAGTTGCTGTCTGGTAATGATGTTCTGTGGACATTTGTCAACTTTGCCGGGGAGGATCACACTAACTTTCAAACACTTGTAGCATTTTTGAGAATGCTGAGTACCTTGGCTTCTAGTGCTGAGGGTGCTTCCAAAGTTTTTGAGTTACTTCAGGGAAAAACATTCCGTTCTATCGGATGGAGCACTTTATTTGATTGTTTATCAATTTATGAGGAAAAGTTCAAACAAGCTGTGCAAAGTCCTGGCACAGTTTTGCCAGAGATACAGGAAGGAGATGCCAAAGCACTTGTTGCTTACTTGAATGTTCTGCAAAAGGTTGTTGAAAATGCGAATCCCGTAGAAAGGAAGAATTGGTTCCCTGATATTGAGCCGTTGTTCAAGCTGCTTGGTTATGAAAATGTCCCTCCCTATCTTAAGGGTGCGCTAAGAAATGCGATAGCTACTTTTGTTCAAGTATCACCAGTTATGAAAGATACAACTTGGAGGTATTTAGAGCAATATGATCTACCTGTAGTTGTTGGGAATACAACACAACCCTTGACAACACAGGTTTATGATATGCGATTTGAGCTGAATGAAATTGAAGCTAGGAGGGAGCAATACCCTTCAACTATATCATTCATTAATTTGTTGAATACACTTATTGCTGCTGAAAAGGATGTTAGTGATAGAGGGCATAGATTCATTGGCATCTTTAAATTCATTTATGATCATGTCTTTGGGCCATTCCCACAGAGAGCTTATGCTGATCCGTGTGAGAAGTGGCAACTTGTCATAGCTTGCCTCAAACATTTCCACATGATGCTGAGCATGTATAGTATCAGAGATGAGGATATTGACAGCGTCGTGGACCAATATCAGCTATCAGAAGCAGGGCAATCTACTCCGCTGCAGATGCAGCTGCCTTTAATAGAATTGATGAAAGATTTTATGAGTGGTAAAACTGTGTTTCGGAATATCATGAGTATTCTTTCACCAGGAGTCAATTATCTAATCGGTGAACGAACAAGTCAAATTTACGGGCAACTTCTTGAAAAAGCTGTCCTGCTTTCTTTGGAAATTATAAATCTCGTATTGGAGAAAGATTTAGCTGTGTCTGATTTTTGGCGTCCTTTGTATCAACCTCTGGATGTCATTCTCTCACAAGATCAGAACCAAGTTGTGGCTTTATTGGAGTATGTCAGATATGATTTGCAGCCCCATGTTCAACAGTCCTCTATCAAAATAATGAACATCCTTAGTTCTCGCATGGTTGGGCTTGTTCAGTTGCTCATAAAATCCAATGCTGCAGGGAGCTTGATTGAGGATTATGCTGCCTGCTTAGAGCTGCGATCTGAAGAATGTCAAATTATTGAGGACTCCCGTGAAGATTCAGGCGTTCTCATACTGCAACTACTTATTGATAATATTAGTCGGCCTGCCCCGAATATCGCACATCTATTACTCAAATTTGATGTCAATAGCCCTGTGGAGAGGACCATGCTTCAGCCAAAATTTCACTATAGTTGTTTGAAGGTCATTCTTGATGTGTTGGAAAATCTTTTGAAGCCTGATGTCAATGCTTTTCTCCATGAATTTGCGTTTCAGCTTCTTTATGAGTTATGTACAGATCCCCTGACTTGTGGTCCTATGATGGATTTGTTAAGCACCAAAAAGTATTGGTTCTTTGTGAAGCATCTGGATATAATTGGTATTGCTCCACTACCCAAAAGGAATAGTAGTCAGGCACTTCGCGTCAGTTCCCTTCATCAGAGGGCATGGCTGTTAAAGCTGCTAACAGTAGAATTACATGCGGCTGATATGTCTAGTTCCACCCATCGAGAAGCTTGTCAAAGTATCTTATCTCAATTATTTGGGGACGGAATTTTTGAATATGATGCTGATCTTGGTGTATCTTCTCCCAATCATCAAAGCAGTCCTGCAATGAATGGAGCCAGAATGATTAGTAAGGCTAAGGTATTGGAGTTGCTTGAAGTTGTCCAGTTTAAATCTCCTGATACTTTGTTGAAATCTTCACAAGCTGTTTCGAGCGCGAAATATGGGTTTCTGGCTGAAGATATACTCACCAATCCTGCAACTTGTGAAAAAGGTGGTGTTTACTATTACTCAGAGCGTGGAGACCGTTTAATTGATCTAGCTGCATTTCGTGACAAATTATGGCAGAAGTATAGCTTGTTTGATCCCCAGAATAGCTCCTTTAATAGTGAAGTTGAGCTTAATGAAATTCGAGATGCAATTCAACAGCTGTTACGATGGGGTTGGAGATACAACAAAAATCTTGAAGAACAAGCAGCTCAGCTTCATATGTTAACTGGCTGGTCTCAAATTGTTGAGGTCTCGGCCTCCAGAAAAATATCCTCTCTTCCCAACCGTTCTGAAATATTATTTCAGTTGCTAGATGCCTCTCTCAGTGCTTCTGGTTCTCCTGACTGTTCATTGAAGATGGCACTGATATTGACACAGGTTGGTCTCACATGCATGGCCAAGCTACGTGATGAAAGGTTCTTATGCCCTAGTGGTTTAAACAATGATACTGTCACTTGTCTTGACATCATGATGACAAAACAATTATCTAATGGAGCATGCCACTCTATTCTATTCAAGCTTATACTGGCAATTCTTAGAAACGAATCATCAGAAGCATTGAGGAGGCGCCAATACGCTTTGCTCCTTAGCTATATCCAGTACTGTCAGCATATGCTTGATCCTGATCTTCCAACCACAGTTCTGCAATTATTGACAATGGATGAACAGGAAAATGGAGATCTGGATCTGGAAAAGATTGTCAAAGATCAGACTGAAATGGCACGTGCAAATTTTTCAATAATAAGGAAGGAAGCTCAATCACTTCTAGATCTGATCATAAAAGATGCAACCCATGGCAGTGAATCTGGAAAGACTATCTCGCTCTATGTTTTGGATGCTTTAATTTGCATTGATCATGAAAAGTTTTTCTTGAGCCAACTGCAAAGCAGAGGCTTTTTGAGGTCTTGTCTTGTGAGCATCAATAACTTTTCTCAGGATGGTGGGCTATCTTTGGAGTCAATGCAGCGTGTCTGCACTCTTGAAGCTGAACTTGCTCTTCTTCTGAGAATTAGCCACAAGTATGGGAAATCAGGGGCCCAAGTGCTTTTTTCAATGGGTGCATTCGAGCACATTTCTGCCTGTAGGGCACTGAGTATACAATTGAAGGGAAGCTACCAGCGCATGGATGGAAAGTTTGGCAGAGAATTGTCAGTTGACGTTGATAAACAACGAATGATCATTGCTCCAATCTTGAGAGTGGTGTTTTCACTTACTTCATTGATTGATGCATCTGAATTTTTTGAGGTTAAAAATAAAGTTGTCCGTGAAGTCATTGAATTTGTAGGAGGTCATCAATTACTTTTTGATCAAATTCTTCGAGAAGATCTTTCTGATGCTGATGACTTGACAATGGAACAAATAAATCTGGTGGTTGGCATACTTACAAAGATCTGGCCATATGAAGAGAGTGATGAATATGGTTTTGTTCAAGGGCTTTTTGTGATGATGCGTTTTCTTTTCTCTCGTGATCCAGATTGTTTTATTACAAACCAATCCATACGTTTTCTGGAGGAAAGGCGGAAGGCAGCAGTGAATGTTTCTCGTCTTTGCTTTAGCCTGAGCTCTTATCTCTGTTTTCTTGTAACGAAGAAGTCTTTAAGATTGCCGGTCTCAGATGGTCCAATGGACTATCGTGCTTCCGCTGCTCAGCAACAGCCAACCTTGAATTTACTTGGTTTTCTTTTGAACTCTCTGGCTACAGCACTGGAAAGGGCTACGGAGGACAGATATTTACTGCTTAGCAAGATTCAAGATATAAATGAATTATCAAGACAGGAAGTGGATGAAATCATTAACATGTGTATTCCCAAGGGCTGTTTTTCGTCATCTGAAAACATTCAGAAAAGGAGATATATTGCAATGGTGGAGATGTGCCAGATTATTGGAGATAGGAATAAACTGATGACACTATTACTTTTACTGGCGGAAAACGTGATGAATATTATCCTTGTCCATTTTCAGGACAGTTCTTTTGAATGTGGCACCAAACCATACGCAAAAGACGACTTGAATTTGCTTTGTGGAAAGTTAATCTCAGCTTTGGAGAGGCTTGAACTTCTAAGCGAGGATAAAACGGGTCATGACCTTAAGGTGTTCCGAAGATTAGCTAGTTCTCTGAAAGAAATATCGATTCAGAAGTCAGCTGTTTGA

Protein:   MEDQDSDPSRNRIAGSFVPICLIFGGALREPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLRMLSTLASSAEGASKVFELLQGKTFRSIGWSTLFDCLSIYEEKFKQAVQSPGTVLPEIQEGDAKALVAYLNVLQKVVENANPVERKNWFPDIEPLFKLLGYENVPPYLKGALRNAIATFVQVSPVMKDTTWRYLEQYDLPVVVGNTTQPLTTQVYDMRFELNEIEARREQYPSTISFINLLNTLIAAEKDVSDRGHRFIGIFKFIYDHVFGPFPQRAYADPCEKWQLVIACLKHFHMMLSMYSIRDEDIDSVVDQYQLSEAGQSTPLQMQLPLIELMKDFMSGKTVFRNIMSILSPGVNYLIGERTSQIYGQLLEKAVLLSLEIINLVLEKDLAVSDFWRPLYQPLDVILSQDQNQVVALLEYVRYDLQPHVQQSSIKIMNILSSRMVGLVQLLIKSNAAGSLIEDYAACLELRSEECQIIEDSREDSGVLILQLLIDNISRPAPNIAHLLLKFDVNSPVERTMLQPKFHYSCLKVILDVLENLLKPDVNAFLHEFAFQLLYELCTDPLTCGPMMDLLSTKKYWFFVKHLDIIGIAPLPKRNSSQALRVSSLHQRAWLLKLLTVELHAADMSSSTHREACQSILSQLFGDGIFEYDADLGVSSPNHQSSPAMNGARMISKAKVLELLEVVQFKSPDTLLKSSQAVSSAKYGFLAEDILTNPATCEKGGVYYYSERGDRLIDLAAFRDKLWQKYSLFDPQNSSFNSEVELNEIRDAIQQLLRWGWRYNKNLEEQAAQLHMLTGWSQIVEVSASRKISSLPNRSEILFQLLDASLSASGSPDCSLKMALILTQVGLTCMAKLRDERFLCPSGLNNDTVTCLDIMMTKQLSNGACHSILFKLILAILRNESSEALRRRQYALLLSYIQYCQHMLDPDLPTTVLQLLTMDEQENGDLDLEKIVKDQTEMARANFSIIRKEAQSLLDLIIKDATHGSESGKTISLYVLDALICIDHEKFFLSQLQSRGFLRSCLVSINNFSQDGGLSLESMQRVCTLEAELALLLRISHKYGKSGAQVLFSMGAFEHISACRALSIQLKGSYQRMDGKFGRELSVDVDKQRMIIAPILRVVFSLTSLIDASEFFEVKNKVVREVIEFVGGHQLLFDQILREDLSDADDLTMEQINLVVGILTKIWPYEESDEYGFVQGLFVMMRFLFSRDPDCFITNQSIRFLEERRKAAVNVSRLCFSLSSYLCFLVTKKSLRLPVSDGPMDYRASAAQQQPTLNLLGFLLNSLATALERATEDRYLLLSKIQDINELSRQEVDEIINMCIPKGCFSSSENIQKRRYIAMVEMCQIIGDRNKLMTLLLLLAENVMNIILVHFQDSSFECGTKPYAKDDLNLLCGKLISALERLELLSEDKTGHDLKVFRRLASSLKEISIQKSAV